Teaching & Tools

of the Deponte lab

Lectures & Seminars

Protein Biochemistry (German)

Lecturer: M. Deponte

Course: See here

Term: Summer semester

 

Venue & Time:

HS 52-207 / Mon 845 - 930 

HS 52-204 / Tue 1015 - 1145

 

Content:

  • Advanced amino acid metabolism (rep. amino acids, enzyme mechanisms, connections with carbon metabolism, mediators/hormons/neurotransmitters, nitrogen excretion)
  • Protein structure (rep. primary to quaternary structure, folding problem, structure-function relationships)
  • Intracellular protein turnover (synthesis, folding, sorting, secondary modifications, degradation)
  • Protein production and purification (methods in research & industry)

 

OpenOlat Material: See here

Molecular Parasitology (Engl.)

Lecturer: M. Deponte

Course: See here

Term: Summer semester

 

Venue & Time:

Room 54-582 / flexible

 

Content:

  • Overview and phylogeny of parasitic protists
  • Special cell organelles and metabolic pathways
  • Molecular parasitology
  • Chemical and genetic rescue strategies
  • Drug development (screening vs. rational drug design, target identification)
  • Resistance mechanisms
  • Current parasite/pathway/drug study of choice

 

OpenOlat Material: See here

Comparative Biochemistry (German)

Lecturer: M. Deponte

Course: See here

Term: Winter semester

 

Venue & Time:

HS 52-204 / Mon 1215 - 1345 

HS 46-280 / Wed 845 - 930

 

Content:

  • Introduction (organismic diversity, metabolic compartmentalization)
  • Comparison of metabolic pathways (examples of analogous & differing reactions, purine and pyrimidine metabolism)
  • Model systems and applications (eukaryotic and prokaryotic model systems, molecular tools)
  • Comparison of pro- and eukaryotes (energy metabolism, information systems, growth and reproduction, optional: defence & immune systems or motility)

 

OpenOlat Material: See here

Enzymology (Engl.)

Lecturer: M. Deponte

Course: See here

Term: Winter semester

 

Venue & Time:

Room 54-582 / Tue 900 - 1045 

 

Content:

  • Enzyme classification
  • Principles of enzyme catalysis
  • Steady-state and pre-steady state kinetics
  • Enzyme inhibitors
  • Allostery and cooperativity
  • Data analysis and evaluation
  • Selected enzyme mechanisms and examples

 

OpenOlat Material: See here

Practical Courses

Current Biochemistry

Supervisor: M. Deponte

Course: See here

Term: WiSe/SuSe

 

Content:

Selected current biochemical research in enzymology and/or molecular parasitology, e.g., methods in molecular biology, cell culture, CRISPR-Cas9 genetics, western blot analysis, protein purification, steady-state and/or stopped-flow enzyme kinetic measurements. The exact content of the practical module depends on current research activities. 

Supervision capacity and internship options are limited. Please plan ahead and submit a timely request via email.

Structural Biochemistry & Enzymology

Supervisor: M. Deponte

Course: See here

Term: WiSe/SuSe

 

Content:

Selected current biochemical research methods in enzymology and protein structure-function analyses. The exact content of the practical module depends on current research activities. 

Supervision capacity and internship options are limited. Please plan ahead and submit a timely request via email.