Teaching & Tools

of the Deponte lab

Practical Courses

Current Biochemistry

Supervisor: M. Deponte

Course: See here

Term: WiSe/SuSe

 

Content:

Selected current biochemical research in enzymology and/or molecular parasitology, e.g., methods in molecular biology, cell culture, CRISPR-Cas9 genetics, western blot analysis, protein purification, steady-state and/or stopped-flow enzyme kinetic measurements. The exact content of the practical module depends on current research activities. 

If you are interested in a practical course, feel free to contact members of the lab or reach out directly to Marcel Deponte via email. Please note that supervision capacity and internship opportunities are limited, so early planning is strongly recommended.

Structural Biochemistry & Enzymology

Supervisor: M. Deponte

Course: See here

Term: WiSe/SuSe

 

Content:

Selected current biochemical research methods in enzymology and protein structure-function analyses. The exact content of the practical module depends on current research activities. 

If you are interested in a practical course, feel free to contact members of the lab or reach out directly to Marcel Deponte via email. Please note that supervision capacity and internship opportunities are limited, so early planning is strongly recommended.

Lectures & Seminars

Protein Biochemistry (German)

Lecturer: M. Deponte

Course: See here

Term: Summer semester

 

Venue & Time:

HS 52-207 / Mon 845 - 930 

HS 52-204 / Tue 1015 - 1145

 

Content:

  • Advanced amino acid metabolism (rep. amino acids, enzyme mechanisms, connections with carbon metabolism, mediators/hormons/neurotransmitters, nitrogen excretion)
  • Protein structure (rep. primary to quaternary structure, folding problem, structure-function relationships)
  • Intracellular protein turnover (synthesis, folding, sorting, secondary modifications, degradation)
  • Protein production and purification (methods in research & industry)

 

OpenOlat Material: See here

Molecular Parasitology (Engl.)

Lecturer: M. Deponte

Course: See here

Term: Summer semester

 

Venue & Time:

Room 54-582 / flexible

 

Content:

  • Overview and phylogeny of parasitic protists
  • Special cell organelles and metabolic pathways
  • Molecular parasitology
  • Chemical and genetic rescue strategies
  • Drug development (screening vs. rational drug design, target identification)
  • Resistance mechanisms
  • Current parasite/pathway/drug study of choice

 

OpenOlat Material: See here

Comparative Biochemistry (German)

Lecturer: M. Deponte

Course: See here

Term: Winter semester

 

Venue & Time:

HS 52-204 / Mon 1215 - 1345 

HS 46-280 / Wed 845 - 930

 

Content:

  • Introduction (organismic diversity, metabolic compartmentalization)
  • Comparison of metabolic pathways (examples of analogous & differing reactions, purine and pyrimidine metabolism)
  • Model systems and applications (eukaryotic and prokaryotic model systems, molecular tools)
  • Comparison of pro- and eukaryotes (energy metabolism, information systems, growth and reproduction, optional: defence & immune systems or motility)

 

OpenOlat Material: See here

Enzymology (Engl.)

Lecturer: M. Deponte

Course: See here

Term: Winter semester

 

Venue & Time:

Room 54-582 / Tue 900 - 1045 

 

Content:

  • Enzyme classification
  • Principles of enzyme catalysis
  • Steady-state and pre-steady state kinetics
  • Enzyme inhibitors
  • Allostery and cooperativity
  • Data analysis and evaluation
  • Selected enzyme mechanisms and examples

 

OpenOlat Material: See here